Free EDF(+)
software and datafiles
Many
researchers and programmers have shared their files and software,
either on an individual basis or in the framework of a larger
group or project. In the name of all EDF users, I sincerely
acknowledge their contributions: they make life a lot easier. This
page aims to list all freely available EDF(+) files and software,
including ours. Your contribution, too, will be very much
appreciated. Please inform me if you should (not) be on this list!
Disclaimer
regarding any downloads from this website.
All contributors
to this website can make mistakes and most of them do not have
any relevant insurance or certification. The files may contain
errors. Making them available through this website implies no
commitment or liability on my side.
Diego Alvarez-Estevez
The Downloads
2008-2021. Polyman tested for
MS-Windows 10 and older is a free EDF(+) viewer and scoring system. It has utilities for signal analysis and visualization, checks EDF(+) file compatibility, supports video synchronization, and has several export and reporting possibilities, including recording de-identification. It allows manual scoring and it also is equipped with some automatic analysis routines. Installer comes with demo PSG's, video and scorings. If you want to try it, just start with the Tours that are included in the User manual (see Manu Help). The last free version available for download was released in April 2021. At present the project continues its internal development at Haaglanden Medisch Centrum, but due to policy changes no further free versions of the application are expected to be released in the near future. Either way, if considering trying this version, please take into account disclaimers below, which still apply.
2017-2021. Polyman Report Generator for
MS-Windows 10 and older allows creation of sleep reports using standard EDF+ annotation files. Polyman's sleep report generating capabilities are made available as a separate software piece within this project. This allows the possibility of interacting with the report generator from any programming language, script, or even a system console. Added possibilities include the batch processing of EDF+ files and the possibility to export to several formats including XML, PDF or PNG.
DISCLAIMER (i): The free versions of Polyman and Polyman Report Generator available through this website may NOT be used for medical diagnosis or therapy. A major reason to freely distribute Polyman, is to promote the use of EDF(+). Use it at your own risk, for research or educational purposes only. Polyman is a complicated program that inevitably contains mis-interpretations, mistakes, and bugs. We cannot and do not accept any liability for damages related to the use of Polyman. We sincerely urge you to regularly check all results obtained with Polyman. We cannot guarantee the safety and integrity of your data
DISCLAIMER (ii): Some antivirus packages might issue a false positive when downloading or executing the Polyman software for the first time. This is a known issue caused by some encryption/anticrack protection layer within the Polyman executable, which sometimes confuses the antivirus software. As long as you have downloaded the program from the official edfplus site (www.edfplus.info/downloads) you should be perfectly fine. However we cannot and do not accept any liability for damages related to the desactivation of your antivirus software. If you receive one of such messages, you are entitled to inform your antivirus software provider so they can perform an in-depth analysis of the contents of the file, and eventually update their protection policies to skip the warning.
2023. Kostas Rotas mantains a desktop EDF Viewer application that is available for Windows, MacOS, and Ubuntu, including also a mobile version for Android. All versions are free software and can be downloaded from his website. The source code of EDF Viewer for desktop, written in C++, can be found in Github under the MIT License.
2022. Introduced in version R2021a, the Signal Processing toolbox of Matlab includes functionality for visualizing and analyzing data stored in EDF and EDF+ files.
2003-2022. BrainBay, developed by Christoph Veigl and Jeremy Wilkerson, is an open-source biosignal software project with a focus on bio- and neurofeedback applications, which supports reading and writing of files in EDF format.
2021. Luna is an open-source C/C++ software package developed by Shaun Purcell at Brigham & Women's Hospital, Hardvard Medical School, for manipulating and analyzing polysomnographic recordings, with a focus on sleep EEG, which can read, manipulate and write large data sets of EDF and EDF+ signals
2021. Holger Nahrstaedt has developed a python library which can read/write EDF+ files based on EDFlib. The project is available in GitHub as well as through the Python Package Index.
2021. Michael Prerau’s Laboratory at Harvard Medical School and Brigham and Women’s hospital has released GUI-based EDF de-identification open source software (for mac, PC, and linux). Simple functions for matlab and python have also been made available for people who want to approach this programmatically
2006-2021.
Teunis van Beelen offers open source EDF+ software, including an EDF+ browser, a Nihon Kohden
to EDF+ and an EMSA
to EDF+ converter, a (multichannel multifrequency) EDF to ASCII converter, a EDF writer for Labview, and programming libraries for C/C++, Java, and Python to read and write EDF/EDF+ files.
2019. GitHub project EDFplusLibraryR contains a set of functions for the R programming language for reading and writing event annotations from and to EDF+ files .
2018. OpenBCI to EDF is a Matlab/Octave script to carry out the conversion from the OpenBCI format (as resulted from logging the results to a SD card) to EDF.
2018. Johannes W. Dietrich at Ruhr University of Bochum (Germany) has made available the PUMA Repository containing a collection of Free Pascal units for medical informatics. The code includes a support engine for reading, writing, parsing and composing multichannel biological signals in EDF and EDF+.
2017. Bilal Zonjy at Case Western Reserve University in USA has created web browser-based EDF viewer using javascript, HTML and CSS. The viewer runs completely on client side using a web browser and it can run offline. The code is open and it is accesible via GitHub.
2016. Cristiano Silva jr at the University of Brasília in
Brazil published an EDF-processing
library for the Go
/ Golang programming language.
2016. Jan Vis at Vis Consultancy published an R-package EDF reader on
GitHub as well as on CRAN (search edfReader).
2016. Filip Plesinger at the Institute of Scientific Instruments
of Academy of Sciences of Czech Republic (ISI ASCR) provides the
software Signalplant for (bio)signal processing, visualization and experimentation
that reads EDF, with source
code and a video
tutorial.
2015. Dennis Dean at Harvard Medical School – Brigham and Women’s
Hospital provides an EEG
spectral analysis program for EDF sleep recordings. The
program is configured to work with EDF data from the National Sleep Research Resource.
Source code, documentation, examples and a getting started
guide can be found on the project’s GitHub page.
2014. The Montreal
Archive of Sleep Studies (MASS) offers an open-access
database of 200 clinical whole-night PSGs and various annotations in EDF+.
2014. The American National Sleep Research Resource (NSRR) offers thousands of EDF polysomnograms with other co-variates, a Matlab
EDF viewer and a Java EDF
editor.
2002-2014. George Moody at MIT offers open-source software (for
GNU/Linux, Mac OS X, MS-Windows, and most other platforms) to
convert between EDF and other PhysioBank-compatible formats (mit2edf)
and to convert EDF+ annotations to PhysioBank-compatible
annotation files (rdedfann).
The open-source WFDB software
package includes mit2edf and rdedfann, as well as many other
applications for biomedical signal processing and analysis, all
built on a shared library for creating applications that read EDF
and other compatible files directly from local storage or from web
resources such as PhysioNet's PhysioBank.
Since 2008, the set of compatible formats has included EDF, so it
is no longer necessary to reformat EDF files in order to read them
with any of the WFDB software. PhysioBank's open access
collections contain nearly 200 full overnight EDF polysomnograms
with hypnograms, including the CAP
Sleep Database (108 PSGs with hypnograms from subjects with
a variety of sleep-related disorders and healthy controls, with
annotations of cyclic alternating pattern (CAP) activity, from the
Ospedale Maggiore of Parma and the Politecnico di Milano); the Sleep-EDF
Database (61 PSGs from healthy subjects, including some who
had mild difficulty falling asleep, from our group at
MCH-Westeinde Hospital, Den Haag); an example
PSG from the gigantic Sleep Heart Health Study (SHSS) that
is now (2014) at the National
Sleep Research Resource; and the SVUH/UCD
Sleep Apnea Database (25 PSGs with simultaneous
three-channel Holter ECGs (also in EDF), from St. Vincent's
University Hospital and University College Dublin). Also available
from PhysioBank in EDF are two collections of fetal ECG recordings
(the Abdominal
and Direct Fetal ECG Database from the Medical University of
Silesia, Poland, and the Non-Invasive
Fetal Electrocardiogram Database from the Universitat de
Valencia).
2013 The Brainstorm
open-source Matlab EXG imaging software reads EDF and EDF+.
2013 The FC
Donders Institute offers the Fieldtrip open-source
Matlab software for EEG and EMG analysis that reads EDF and
EDF+.
2013 Fabien
Feschet offers R
code to open EDF.
2013 The fMRI
Artefact rejection and Sleep Scoring Toolbox (FASST) of the
Cyclotron Research Centre and University of Liège, Belgium, is
written in Matlab and reads EDF.
2013 The Stanford EEG
Viewer (SEV) is written by Hyatt Moore in Matlab and reads
and writes EDF.
2013 Dennis Dean at Harvard Medical School - Brigham and Women's
Hospital, in collaboration with Case Western University, offers
several open-source EDF tools including a Matlab EDF loader and
viewer.
2007-2013.
Our NeuroLoop analyzer for sleep slow waves, spindles and other brain rhythms. Reads an
EEG signal from an EDF file, tracks the degree of neuronal
coupling in the underlying cell network, and puts the result in
another EDF file (look for the signal with label 'Gain'). The
algorithms and some applications are in B.Kemp et al, IEEE-BME
47(9), 2000: 1185-1194. We made an open-source
C# version of the Neuroloop analyzer including a C#
EDF/EDF+ library .
2006-2013. Horace Townsend provides a web-based viewer for EEG
education that lets you browse through a selection of EDF
recordings. Registration required.
2004-2013. The OpenXDF consortium (Neurotronics Inc) offers the Maximus EDF viewer.
2004-2008. Our EDF/EDF+ to WAV converter. This program converts 1 (mono) or 2 (stereo) signals
from an EDF/EDF+ file into standard audio (WAV) format. Some results in MP3 format.
2003-2013. The SCCN at San Diego University offers the open-source Matlab EDF toolbox EEGLAB that also reads EDF.
2003-2013. PhysioMimi at Case Western Reserve University offers a Matlab EDF checker/editor
and viewer. Registration required.
1999-2013. Alois Schloegl and Clemens Brunner, both at Graz
University in Austria, offer the BioSig toolbox for C/C++, Octave
and Matlab and the open source C++ SigViewer for
browsing and analyzing recordings, all for various formats
including EDF.
2012. Boris Reuderink has this Python EDF+ reader.
2010-2012. Chris Lee-Messer has this Python
EDF/EDF+ reader/writer, based on Teunis' C++ library.
2010-2012. Scilab has this Scilab EDF/EDF+
reader/writer, based on Teunis' C++ library.
2010-2012. Our MS_Windows EDF+ annotations
exporter. It requires the .NET framework 3.5 or higher.
2009-2012. Teunis van Beelen made opensource hardware: a 12-channel ADC
converter that writes EDF+.
2010-2012. Our DC attenuator
and de-attenuator handles the large DC offset in fullband
EEG recordings that would otherwise drive the biosignal outside
the range of 16-bit EDF(+). Your own attenuator can be tested with
our EDF viewer Polyman because its de-attenuator reconstructs the
original signal. Your own de-attenuator can be tested with this Fullband EEG recording that contains DC-attenuated EEG signals. Do not forget to scale
your display, because fullband EEG obviously is not between the
traditional +/-100uV levels. If you use Polyman, scaling is done
automatically if you open this Fullband Polyman
Template and then select the sample file.
2003-2006. Raphael Schneider made the open source software libRASCH, for viewing and
analysis of signals in many formats including EDF and EDF+.
2002-2006. Jesus Olivan at the Hospital Carlos III, Clinical
Neurophysiology Unit, Madrid, Spain, co-developed EDF+ and made software, data and
tutorials for EDF and EDF+ (including discontinuous EDF+).
2003-2005. Our old EDF
compatibility checker. A better one, also handling
EDF+, is in Polyman.
2004. Our EDF-to-ASCII
converter. Exports one of the signals to an ASCII file and
all EDF header information, including calibration, about this
signal to an additional textfile.
2004-2005. Some of our calibration
signals for checking the time and amplitude of your EDF(+)
viewers. They contain sinewaves and blocks of specified amplitude
and timing. A typical K-complex illustrates EEG polarity and the
"negative-up" rule in Clinical Neurophysiology.
2004-2005. A 20-minute sleep recording of a severe OSAS patient during NREM- and
REM-sleep with annotated QRS complexes.
2004-2008. Alex B Samardzic made the open source EDF software TEMPO for animated 3D
EEG maps.
2002. Our old DOS tools for editing
EDF files: cut and paste parts of the data or edit the
header.
1993-2003. Our old EDF viewer Polyman
for DOS which includes manual sleep scoring. Includes a
20-minute EDF file recorded during sleep stage 2 and REM-sleep.
